8B6D
Crystal structure of UDP-glucose pyrophosphorylase from Thermocrispum agreste DSM 44070 in complex with UDP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-05-26 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.976300 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 65.752, 65.752, 329.552 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 82.524 - 2.100 |
| Rwork | 0.175 |
| R-free | 0.22090 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | apo-TaGalU |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.855 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 82.530 | 2.180 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.090 | 1.260 |
| Rmeas | 0.093 | 1.280 |
| Rpim | 0.024 | 0.240 |
| Number of reflections | 43788 | 4253 |
| <I/σ(I)> | 29.1 | 3.86 |
| Completeness [%] | 100.0 | |
| Redundancy | 26.4 | 26.9 |
| CC(1/2) | 1.000 | 1.000 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 5.5 | 292.15 | sodium citrate, PEG 3350 |






