8B3Y
Native Thermogutta terrifontis endoglucanase catalytic domain with a linker at C-terminal from glycoside hydrolase family 5 (TtEnd5A-CDC)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-22 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.980, 69.520, 81.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.260 - 1.250 |
R-factor | 0.13793 |
Rwork | 0.137 |
R-free | 0.16052 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8ag9 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.378 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.260 | 1.280 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.055 | 2.076 |
Rmeas | 0.059 | 2.183 |
Rpim | 0.017 | 0.952 |
Number of reflections | 93566 | 6204 |
<I/σ(I)> | 15.7 | |
Completeness [%] | 99.0 | 90.4 |
Redundancy | 12 | 5.4 |
CC(1/2) | 1.000 | 0.348 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | Well number B2 conditions of LMB screen: 1.9M Ammonium Sulphate, 0.1M MES pH 6.5 + Additive Screen (well number C11 conditions of Grid Screen Salt HR2-248: 2.9 M Sodium malonate pH 5.0) TtEnd5A CD-C variant = 10.6 mg/ml. 10x Cellobiose (100 uM) |