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8B3Y

Native Thermogutta terrifontis endoglucanase catalytic domain with a linker at C-terminal from glycoside hydrolase family 5 (TtEnd5A-CDC)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-04-22
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths59.980, 69.520, 81.280
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.260 - 1.250
R-factor0.13793
Rwork0.137
R-free0.16052
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8ag9
RMSD bond length0.008
RMSD bond angle1.378
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2601.280
High resolution limit [Å]1.2501.250
Rmerge0.0552.076
Rmeas0.0592.183
Rpim0.0170.952
Number of reflections935666204
<I/σ(I)>15.7
Completeness [%]99.090.4
Redundancy125.4
CC(1/2)1.0000.348
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293.15Well number B2 conditions of LMB screen: 1.9M Ammonium Sulphate, 0.1M MES pH 6.5 + Additive Screen (well number C11 conditions of Grid Screen Salt HR2-248: 2.9 M Sodium malonate pH 5.0) TtEnd5A CD-C variant = 10.6 mg/ml. 10x Cellobiose (100 uM)

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PDB entries from 2024-05-15

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