8B31
Crystal structure of UDP-glucose pyrophosphorylase from Thermocrispum agreste DSM 44070
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-09-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.976 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 48.086, 78.593, 89.788 |
| Unit cell angles | 90.00, 93.89, 90.00 |
Refinement procedure
| Resolution | 48.022 - 1.750 |
| Rwork | 0.196 |
| R-free | 0.22620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3juj |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.649 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 89.580 | 1.780 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Rmerge | 0.059 | 0.866 |
| Rmeas | 0.069 | 1.025 |
| Rpim | 0.035 | 0.541 |
| Number of reflections | 67139 | 3700 |
| <I/σ(I)> | 10.5 | 1.3 |
| Completeness [%] | 99.8 | 99.7 |
| Redundancy | 3.7 | 3.5 |
| CC(1/2) | 0.990 | 0.651 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 292.15 | Bis-Tris-Propane, PEG3350, KSCN, Ethylene Glycol |






