Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8B2G

SH3-like domain from Penicillium virgatum muramidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2017-06-27
DetectorADSC QUANTUM 315
Wavelength(s)1.28249
Spacegroup nameP 1 21 1
Unit cell lengths36.142, 59.824, 36.109
Unit cell angles90.00, 112.13, 90.00
Refinement procedure
Resolution33.479 - 1.500
Rwork0.163
R-free0.17250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8b2s
RMSD bond length0.013
RMSD bond angle1.795
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]59.82059.8201.530
High resolution limit [Å]1.5008.2201.500
Rmerge0.0820.0460.967
Rmeas0.1080.0611.282
Rpim0.0690.0400.835
Number of reflections21381155731
<I/σ(I)>7.418.31
Completeness [%]93.898.966.8
Redundancy43.83.2
CC(1/2)0.9950.9950.261
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293PACT C9=0.2 M LiCl, 0.1 M Hepes pH 7.0, 20% PEG 6K, MMS (microseed matrix screening) from JCSG, C7=0.2 M zinc acetate dehydrate, 0.1 M sodium acetate, 10%w/v PEG 3000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon