8B2F
SH3-like cell wall binding domain of the GH24 family muramidase from Trichophaea saccata in complex with triglycine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-29 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97622 |
Spacegroup name | P 1 |
Unit cell lengths | 26.105, 27.234, 50.039 |
Unit cell angles | 76.68, 81.27, 72.66 |
Refinement procedure
Resolution | 48.497 - 1.183 |
Rwork | 0.113 |
R-free | 0.14600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8b2s |
RMSD bond length | 0.007 |
RMSD bond angle | 1.396 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.500 | 48.500 | 1.200 |
High resolution limit [Å] | 1.180 | 6.480 | 1.180 |
Rmerge | 0.021 | 0.020 | 0.145 |
Rmeas | 0.029 | 0.029 | 0.206 |
Rpim | 0.021 | 0.020 | 0.145 |
Number of reflections | 27938 | 245 | 96 |
<I/σ(I)> | 28.1 | 56.8 | 3 |
Completeness [%] | 67.0 | 98.4 | 4.7 |
Redundancy | 3.4 | 3.6 | 1.3 |
CC(1/2) | 0.999 | 0.999 | 0.977 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 292 | 10 mM triglycine added to the protein prior to crystallisation. Morpheus screen, condition D10 |