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8B24

Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 3600-seconds post reaction initiation with Na+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-18
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9762
Spacegroup nameP 1 21 1
Unit cell lengths83.108, 111.068, 105.419
Unit cell angles90.00, 108.90, 90.00
Refinement procedure
Resolution99.740 - 4.530
R-factor0.3275
Rwork0.326
R-free0.36060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5lzq D_1292125586
RMSD bond length0.003
RMSD bond angle0.636
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]99.7405.220
High resolution limit [Å]4.5304.530
Number of reflections6063303
<I/σ(I)>10.1
Completeness [%]87.8
Redundancy7.2
CC(1/2)0.9950.537
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829360 mM Tris-HCl pH 8.0, 26% v/v PEG400, 175 mM KCl, 2.4 mM MgCl2, 2 mM K4PPi, 20 mM NaCl

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