Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8B22

Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 300-seconds post reaction initiation with Na+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-18
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9762
Spacegroup nameP 1 21 1
Unit cell lengths83.928, 110.626, 106.154
Unit cell angles90.00, 108.26, 90.00
Refinement procedure
Resolution79.700 - 3.980
R-factor0.2357
Rwork0.233
R-free0.26530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)D_1292125586
RMSD bond length0.003
RMSD bond angle0.590
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.8104.090
High resolution limit [Å]3.9703.970
Number of reflections14163708
<I/σ(I)>6.1
Completeness [%]95.7
Redundancy6.4
CC(1/2)0.9750.837
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829360 mM Tris-HCl pH 8.0, 26% v/v PEG400, 175 mM KCl, 2.4 mM MgCl2, 2 mM K4PPi, 20 mM NaCl

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon