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8AVS

Racemic protein crystal structure of aureocin A53 from Staphylococcus aureus in the presence of citrate and acetate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-15
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9119
Spacegroup nameC 1 2 1
Unit cell lengths73.070, 37.280, 113.950
Unit cell angles90.00, 93.05, 90.00
Refinement procedure
Resolution36.480 - 1.210
Rwork0.187
R-free0.22080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2n8o
RMSD bond length0.010
RMSD bond angle1.339
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.4801.230
High resolution limit [Å]1.2101.210
Number of reflections904573651
<I/σ(I)>8.81
Completeness [%]96.680.3
Redundancy3.11.8
CC(1/2)0.9980.617
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.6292A racemic mixture of L-Aureocin A53 and D-Aureocin A53 at 40 mg/mL concentration was mixed 1:1 with 0.2 M ammonium acetate, 0.2 M sodium citrate and 29% PEG 4000 v/v precipitant condition, pH 5.6 in a 1 microlitre sitting drop. Crystals were submerged in 20% PEG 400 in the precipitant solution as cryoprotectant and flash frozen in liquid nitrogen during harvesting.

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