8AVM
Mutant of Superoxide Dismutase sodfm2 from Bacteroides fragilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-22 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.89842 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.430, 117.110, 139.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.000 - 2.000 |
Rwork | 0.193 |
R-free | 0.22890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ues |
RMSD bond length | 0.010 |
RMSD bond angle | 1.546 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.000 | 2.040 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.158 | |
Rmeas | 0.170 | |
Rpim | 0.064 | |
Number of reflections | 88446 | 4451 |
<I/σ(I)> | 11 | 1.4 |
Completeness [%] | 100.0 | 97.6 |
Redundancy | 13.5 | 14.2 |
CC(1/2) | 0.999 | 0.444 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 10 mM zinc chloride, 100 mM sodium acetate pH 5.0 and 20% w/v polyethylene glycol 6000. |