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8AVI

Crystal structure of IsdG from Bacillus cereus in complex with heme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-31
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.969998
Spacegroup nameP 21 21 21
Unit cell lengths46.703, 48.941, 100.931
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.040 - 2.000
R-factor0.2024
Rwork0.201
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8avh
RMSD bond length0.008
RMSD bond angle0.935
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.0402.050
High resolution limit [Å]2.0002.000
Rmerge0.0651.213
Rmeas0.0711.313
Rpim0.0280.498
Number of reflections162271200
<I/σ(I)>12.21.6
Completeness [%]99.7100
Redundancy6.56.7
CC(1/2)0.9970.579
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529818 mg/mL IsdaG (1:1) 12.5% w/v PEG 1000, 12.5% w/v PEG 3350, 12.5% v/v MPD, 0.02 M 1,6-hexanediol, 0.02 M 1-butanol, 0.02 M (RS)-1,2-propanediol, 0.02 M 2-propanol, 0.02 M 1,4-butanediol, 0.02 M 1,3-propanediol, 0.1 M MOPS/HEPES-Na pH 7.5

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PDB entries from 2024-05-15

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