8ATZ
Crystal structure of PPAR gamma (PPARG) in complex with SA112 (compound 2).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00002 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 65.515, 65.515, 157.373 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.330 - 1.950 |
R-factor | 0.1991 |
Rwork | 0.197 |
R-free | 0.24480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tsg |
RMSD bond length | 0.014 |
RMSD bond angle | 1.350 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.330 | 46.330 | 2.020 |
High resolution limit [Å] | 1.950 | 7.550 | 1.950 |
Rmerge | 0.068 | 0.039 | 0.989 |
Rmeas | 0.073 | 0.041 | 1.080 |
Rpim | 0.022 | 0.012 | 0.312 |
Number of reflections | 25916 | 554 | 2487 |
<I/σ(I)> | 14.1 | 2 | |
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 11.1 | 9.9 | 11.6 |
CC(1/2) | 0.999 | 0.999 | 0.867 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | 1.6 M ammonium sulfate, 0.1 M tris pH 7.5 |