8APZ
Crystal structure of wild-type L-N-Carbamoylase from Sinorhizobium meliloti
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-22 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9655 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 133.250, 41.801, 133.996 |
Unit cell angles | 90.00, 94.08, 90.00 |
Refinement procedure
Resolution | 43.220 - 1.750 |
R-factor | 0.1513 |
Rwork | 0.149 |
R-free | 0.18550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AF model |
RMSD bond length | 0.010 |
RMSD bond angle | 1.412 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.530 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.088 | 0.778 |
Rmeas | 0.095 | 0.848 |
Rpim | 0.037 | 0.332 |
Total number of observations | 482305 | |
Number of reflections | 74615 | 3970 |
<I/σ(I)> | 13.3 | |
Completeness [%] | 99.5 | 97.4 |
Redundancy | 6.5 | 6.2 |
CC(1/2) | 0.997 | 0.836 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 294 | 0.2 M sodium acetate, 0.1 M Bis-tris propane and 20 % PEG3350 |