8AD6
Structure of DarB bound to c-di-AMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.617, 42.293, 64.974 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.810 - 1.520 |
Rwork | 0.174 |
R-free | 0.19400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6yj8 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.921 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1-4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.810 | 1.570 |
High resolution limit [Å] | 1.520 | 1.520 |
Rpim | 0.021 | 0.251 |
Number of reflections | 40317 | 998 |
<I/σ(I)> | 19.2 | |
Completeness [%] | 88.0 | |
Redundancy | 7.3 | |
CC(1/2) | 0.999 | 0.826 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293.16 | 0.2 M Lithium sulfate 0.1 M MES 6.0 20 % w/v PEG 4000 |