8A8L
Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 80.770, 108.169, 105.250 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.100 - 1.880 |
R-factor | 0.2001 |
Rwork | 0.198 |
R-free | 0.23570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7pq1 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.075 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.130 | 1.920 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.113 | 1.955 |
Rpim | 0.033 | 0.583 |
Number of reflections | 37815 | 2424 |
<I/σ(I)> | 13.1 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.8 | 12.6 |
CC(1/2) | 0.999 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277.15 | 0.1M Bis-Tris propane pH 8.5, 0.2M Ammonium nitrate, 18% v/v PEG Smear High |