8A25
Lysophospholipase PlaA from Legionella pneumophila str. Corby - complex with PEG fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-22 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.3778 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 82.238, 82.238, 68.447 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 71.220 - 1.730 |
R-factor | 0.159 |
Rwork | 0.158 |
R-free | 0.18330 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.220 | 71.220 | 1.830 |
High resolution limit [Å] | 1.730 | 5.480 | 1.730 |
Rmerge | 0.064 | 0.025 | 1.192 |
Rmeas | 0.065 | 0.025 | 1.223 |
Rpim | 0.015 | 0.006 | 0.274 |
Total number of observations | 519071 | 18832 | 80436 |
Number of reflections | 27102 | 985 | 4089 |
<I/σ(I)> | 28.6 | 99.4 | 2.5 |
Completeness [%] | 95.9 | 99.9 | 100 |
Redundancy | 19.2 | 19.1 | 19.7 |
CC(1/2) | 1.000 | 1.000 | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 292 | 14.7% (w/v) PEG3350, 1% (w/v) PEG 1K, 0.5% (w/v) PEG200, 8.9% (v/v) Tacsimate pH 5, 200 mM NH4I, 1 mM CaCl2 and 1 mM MgCl2; cryoprotection and iodide soaking for iodide-SAD: 10% (v/v) (2R,3R)-(-)-2,3-butandiole, 16% (w/v) PEG3350, 6% (v/v) Tacsimate pH 5, 200 mM NH4I |