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8A1N

Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with fumaryl amide analogue 13

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-26
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9763
Spacegroup nameP 1 21 1
Unit cell lengths60.929, 94.633, 75.356
Unit cell angles90.00, 92.35, 90.00
Refinement procedure
Resolution75.290 - 2.050
R-factor0.1951
Rwork0.193
R-free0.23920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6rrm
Data reduction softwareXDS
Data scaling softwarexia2
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]75.30075.3502.090
High resolution limit [Å]2.0505.5602.050
Rmerge0.0900.0330.821
Rmeas0.0970.0350.889
Rpim0.0370.0130.338
Number of reflections5368027412674
<I/σ(I)>13.253.71.1
Completeness [%]100.099.899.9
Redundancy6.87.16.8
CC(1/2)0.9990.9990.773
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.2 M Ammonium nitrate, 20% PEG 3350

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