8A0M
Capsular polysaccharide synthesis multienzyme in complex with capsular polymer fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-26 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 127.911, 232.806, 129.177 |
Unit cell angles | 90.00, 118.39, 90.00 |
Refinement procedure
Resolution | 63.940 - 3.600 |
R-factor | 0.2222 |
Rwork | 0.220 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold |
RMSD bond length | 0.003 |
RMSD bond angle | 0.567 |
Data reduction software | xia2 (dials) |
Data scaling software | xia2 (dials) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.940 | 3.729 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmeas | 0.183 | 0.884 |
Number of reflections | 76828 | 7658 |
<I/σ(I)> | 8.79 | 1.38 |
Completeness [%] | 99.7 | 99.75 |
Redundancy | 7.1 | 6.7 |
CC(1/2) | 0.988 | 0.796 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.06M Magnesium chloride hexahydrate, 0.06M Calcium chloride dihydrate, 0.1M Imidazole, 0.1M MES monohydrate (acid) pH 6.5, MPD, PEG 1000, PEG 3350 (37.5%(v/v)) protein (9.5mg/ml) and purified polymer (produced by the multienzyme in-vitro) |