7ZSF
Structure of Orange Carotenoid Protein with canthaxanthin bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-04 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 82.569, 82.569, 87.365 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 55.396 - 1.360 |
Rwork | 0.189 |
R-free | 0.21790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xb5 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.957 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 87.290 | 3.070 | 1.400 |
High resolution limit [Å] | 1.360 | 2.890 | 1.360 |
Rmerge | 0.075 | 0.413 | 3.543 |
Rmeas | 0.079 | 0.429 | 3.480 |
Rpim | 0.025 | 0.111 | 0.779 |
Number of reflections | 74252 | 14952 | 5438 |
<I/σ(I)> | 17.1 | 4.8 | 1.1 |
Completeness [%] | 100.0 | 93.6 | 100 |
Redundancy | 19.9 | 19.9 | |
CC(1/2) | 0.963 | 0.519 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 100 mM sodium acetate pH 4.5, 10 % poly-ethylene glycol 20,000, 3 % glycerol |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 100 mM sodium acetate pH 4.5, 10 % poly-ethylene glycol 20,000, 3 % glycerol |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 100 mM sodium acetate pH 4.5, 10 % poly-ethylene glycol 20,000, 3 % glycerol |