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7ZRW

F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-29
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97951
Spacegroup nameP 21 3
Unit cell lengths105.473, 105.473, 105.473
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution74.570 - 1.960
R-factor0.1887
Rwork0.187
R-free0.21020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6hih
RMSD bond length0.011
RMSD bond angle2.060
Data reduction softwareDIALS
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]74.57074.5702.010
High resolution limit [Å]1.9608.7701.960
Rmerge0.0710.0271.928
Rmeas0.0750.0292.029
Rpim0.0230.0100.630
Total number of observations286736292721434
Number of reflections283593552087
<I/σ(I)>14.970.91.1
Completeness [%]100.099.1100
Redundancy10.18.210.3
CC(1/2)1.0000.9990.457
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2912 microlitres of 15 mg/ml protein in 0.1 M HEPES buffer, pH 7.5, mixed with with an equivalent volume of reservoir solution containing 0.01 M ZnSO4, 30% PEG 550 (v/v) and 0.1 M MES, pH 6.5. Cryoprotection in ML plus 10% glycerol

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PDB entries from 2024-05-15

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