7ZPD
Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2293
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-28 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 0.82656 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.712, 60.544, 82.557 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.060 - 1.400 |
R-factor | 0.1322 |
Rwork | 0.131 |
R-free | 0.15250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gpi |
RMSD bond length | 0.006 |
RMSD bond angle | 0.929 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.950 | 1.480 |
High resolution limit [Å] | 1.400 | 1.400 |
Number of reflections | 48827 | 7753 |
<I/σ(I)> | 23.54 | 3.42 |
Completeness [%] | 99.9 | 99.6 |
Redundancy | 7.98 | 7.66 |
CC(1/2) | 0.999 | 0.919 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M sodium acetate 0.2 M ammonium sulfate 11 % PEG2000 |