7ZK1
Crystal structure of cystinosin from Arabidopsis thaliana bound to sybody and nanobody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9999 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 62.787, 319.962, 45.648 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.990 - 2.650 |
Rwork | 0.230 |
R-free | 0.27000 |
Structure solution method | SAD |
Data reduction software | autoPROC |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | BUSTER |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.990 | 79.990 | 2.790 |
High resolution limit [Å] | 2.650 | 8.370 | 2.650 |
Rmerge | 0.542 | 0.134 | 7.095 |
Rmeas | 0.554 | 0.139 | 7.380 |
Rpim | 0.114 | 0.034 | 2.011 |
Total number of observations | 21984 | 54370 | |
Number of reflections | 28079 | 1046 | 4012 |
<I/σ(I)> | 5.9 | 17.9 | 0.5 |
Completeness [%] | 99.9 | 99.9 | 99.9 |
Redundancy | 20 | 21 | 13.6 |
CC(1/2) | 0.996 | 0.996 | 0.379 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.5 | 293 | 27.5% PEG 500DME, 100 mM MES-NaOH, pH 5.50, 100 mM K-formate |