7ZI3
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the OR0642 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978566 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 68.940, 68.940, 120.763 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.750 - 1.900 |
R-factor | 0.1917 |
Rwork | 0.190 |
R-free | 0.23030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kcg |
RMSD bond length | 0.009 |
RMSD bond angle | 1.601 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.750 | 48.750 | 2.020 |
High resolution limit [Å] | 1.900 | 5.680 | 1.900 |
Rmerge | 0.085 | 0.044 | 2.593 |
Rmeas | 0.086 | 0.046 | 2.642 |
Number of reflections | 23515 | 1016 | 3700 |
<I/σ(I)> | 19.73 | 62.36 | 1.12 |
Completeness [%] | 99.9 | 99.7 | 99.8 |
Redundancy | 25.766 | 21.01 | 26.927 |
CC(1/2) | 0.999 | 0.997 | 0.626 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 285 | 0.9 M Sodium citrate, 60 mM HEPES, pH 7.5 |