Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ZGM

Plant N-glycan specific alpha-1,3-mannosidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-17
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97950
Spacegroup nameP 21 21 21
Unit cell lengths65.941, 84.335, 132.581
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution66.290 - 1.430
Rwork0.133
R-free0.17250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wvx
RMSD bond length0.011
RMSD bond angle1.225
Data reduction softwarexia2
Data scaling softwarepointless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0326)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]66.29066.2901.450
High resolution limit [Å]1.4307.8301.430
Rmerge0.0820.0341.196
Rmeas0.0950.0391.444
Rpim0.0480.0200.794
Number of reflections1351301351306477
<I/σ(I)>9.7
Completeness [%]98.8
Redundancy7.16.35.9
CC(1/2)0.9980.9940.502
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293200 mM Potassium citrate and 20% w/v PEG 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon