7ZGB
Structure of yeast Sec14p with NPPM112
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 124 |
Detector technology | PIXEL |
Collection date | 2018-04-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 88.717, 88.717, 99.100 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 2.700 |
R-factor | 0.2213 |
Rwork | 0.218 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1aua |
RMSD bond length | 0.010 |
RMSD bond angle | 1.141 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 7.980 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmeas | 0.142 | 0.142 |
Number of reflections | 23922 | 23922 |
<I/σ(I)> | 8.29 | |
Completeness [%] | 99.5 | |
Redundancy | 3.64 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 294 | 129,5 mM sodium acetate, 64,8 mM TRIS, 4,6 % (w/v) PEG 4000, and 11.9 % (v/v) glycerol adjusted to pH 7.0 |