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7ZG3

Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH011228

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.987
Spacegroup nameP 21 21 21
Unit cell lengths80.790, 81.318, 169.905
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution84.950 - 2.300
R-factor0.27747
Rwork0.276
R-free0.30717
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6g3y
RMSD bond length0.007
RMSD bond angle0.945
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.9002.380
High resolution limit [Å]2.3002.300
Number of reflections505734564
<I/σ(I)>0.9
Completeness [%]100.0
Redundancy24.2
CC(1/2)0.9900.540
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2940.12M Monosaccharides, 0.1M Buffer System 2 (pH 7.5), 30.0% (v/v) GOL_P4K (Morpheus screen, Molecular Dimensions)

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PDB entries from 2024-05-15

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