Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7Z6F

Crystal structure of the substrate-binding protein YejA in complex with peptide fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths70.531, 76.972, 103.817
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution62.190 - 1.650
R-factor0.1915
Rwork0.189
R-free0.23250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5icq 4ony
RMSD bond length0.006
RMSD bond angle0.815
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.1901.680
High resolution limit [Å]1.6501.650
Rmerge0.1161.355
Number of reflections685083281
<I/σ(I)>7.41
Completeness [%]99.695.9
Redundancy4.3
CC(1/2)0.9950.500
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529325% PEG 3350, 0.1 M Bis-Tris pH 5.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon