7Z1B
Nanobody H11-A10 and F2 bound to RBD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.490, 120.860, 171.950 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.010 - 2.300 |
R-factor | 0.19993 |
Rwork | 0.198 |
R-free | 0.24331 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zbp |
RMSD bond length | 0.008 |
RMSD bond angle | 1.497 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.010 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.129 | |
Number of reflections | 55151 | 4029 |
<I/σ(I)> | 12 | 1.2 |
Completeness [%] | 100.0 | |
Redundancy | 13.4 | |
CC(1/2) | 0.998 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Sodium citrate, pH 5.5, 20 % Peg 3000 |