7Z0I
human PEX13 SH3 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-08 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.999995 |
Spacegroup name | I 41 |
Unit cell lengths | 43.949, 43.949, 86.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.238 - 1.800 |
Rwork | 0.182 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wxu |
RMSD bond length | 0.009 |
RMSD bond angle | 1.498 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.390 | 43.390 | 1.840 |
High resolution limit [Å] | 1.800 | 9.000 | 1.800 |
Rmerge | 0.082 | 0.031 | 1.443 |
Rmeas | 0.089 | 0.033 | 1.559 |
Rpim | 0.034 | 0.013 | 0.588 |
Number of reflections | 7660 | 64 | 462 |
<I/σ(I)> | 19.7 | ||
Completeness [%] | 99.9 | 99.1 | 99.5 |
Redundancy | 13.6 | 13 | 13.4 |
CC(1/2) | 1.000 | 1.000 | 0.738 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.01M Zinc chloride, 0.1M Sodium acetate, 20% w/v PEG 6000 |