7Z05
White Bream virus N7-Methyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-08 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.992 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 105.216, 49.787, 53.926 |
Unit cell angles | 90.00, 97.72, 90.00 |
Refinement procedure
Resolution | 52.130 - 2.330 |
R-factor | 0.214 |
Rwork | 0.211 |
R-free | 0.26530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | alpha fold 2 |
Data reduction software | XDS (20200131) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.130 | 52.130 | 2.450 |
High resolution limit [Å] | 2.330 | 7.360 | 2.330 |
Rmerge | 0.131 | 0.041 | 0.924 |
Rmeas | 0.142 | 0.044 | 1.002 |
Rpim | 0.055 | 0.017 | 0.383 |
Total number of observations | 80985 | 2552 | 11742 |
Number of reflections | 12026 | 406 | 1739 |
<I/σ(I)> | 9.9 | 27.3 | 2.4 |
Completeness [%] | 99.9 | 99.3 | 99.9 |
Redundancy | 6.7 | 6.3 | 6.8 |
CC(1/2) | 0.998 | 0.999 | 0.893 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.7 | 293.15 | 0.1 M Tris, 20.3 % PEG 3350, 0.2 M MgCl and 10% isopropanol |