7YZU
Crystal structure of the sulfoquinovosyl binding protein SmoF complexed with SQMe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-14 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.270, 99.380, 53.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.330 - 1.590 |
Rwork | 0.238 |
R-free | 0.26690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 70FY |
RMSD bond length | 0.009 |
RMSD bond angle | 1.507 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.330 | 47.280 | 1.620 |
High resolution limit [Å] | 1.590 | 8.710 | 1.590 |
Rmerge | 0.280 | ||
Rmeas | 0.302 | ||
Rpim | 0.148 | ||
Number of reflections | 48233 | 48233 | 2270 |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 99.4 | ||
Redundancy | 6.9 | 6.9 | 5.6 |
CC(1/2) | 0.980 | 0.980 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.3 M sodium acetate, 0.1 M BIS-TRIS (pH 5.5) and 35% PEG 2000 MME |