7YY1
Mycobacterium abscessus Phosphopantetheine adenylyltransferase ternary complex with 4'-phosphopantetheine & non-hydrolyzable ATP analogue (AMPCPP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 75.651, 125.475, 118.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.787 - 1.697 |
R-factor | 0.2003 |
Rwork | 0.199 |
R-free | 0.22500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5o06 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.137 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX (1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 64.790 | 64.790 | 1.790 |
High resolution limit [Å] | 1.697 | 5.370 | 1.700 |
Rmerge | 0.120 | 0.067 | 1.292 |
Rmeas | 0.127 | 0.071 | 1.371 |
Rpim | 0.041 | 0.025 | 0.448 |
Total number of observations | 16730 | 73621 | |
Number of reflections | 62224 | 2122 | 8912 |
<I/σ(I)> | 16.1 | 34.2 | 3.2 |
Completeness [%] | 99.4 | 99.3 | 98.7 |
Redundancy | 8.6 | 7.9 | 8.3 |
CC(1/2) | 0.998 | 0.997 | 0.873 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.2 M Sodium bromide, 20-24 % PEG3350, 0.1 M Bis-Tris propane pH 6.5 |