7YWJ
Crystal structure of an engineered TycA variant, TycA pPLA (L313P)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-10 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.043, 60.419, 249.243 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.860 - 1.749 |
R-factor | 0.1767 |
Rwork | 0.175 |
R-free | 0.20940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1amu |
RMSD bond length | 0.008 |
RMSD bond angle | 0.960 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.3 (18-SEP-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.900 | 1.812 |
High resolution limit [Å] | 1.749 | 1.749 |
Rmerge | 0.120 | |
Rmeas | 0.124 | |
Rpim | 0.034 | |
Number of reflections | 92757 | 9168 |
<I/σ(I)> | 16.51 | 0.92 |
Completeness [%] | 100.0 | 99.92 |
Redundancy | 13.2 | 12.9 |
CC(1/2) | 0.999 | 0.378 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | (NH4)2SO4 (0.2 M), PEG 3,350 (25% (w/v)), BisTris (0.1 M) pH 5.5, and di-sodium malonate (1 M) |