7YWF
Monocot chimeric jacalin JAC1 from Oryza sativa: dirigent domain with bound galactobiose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-10 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.7749 |
Spacegroup name | H 3 |
Unit cell lengths | 158.050, 158.050, 48.720 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.900 - 2.600 |
R-factor | 0.2448 |
Rwork | 0.242 |
R-free | 0.27770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ood |
RMSD bond length | 0.002 |
RMSD bond angle | 0.567 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MoRDa |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.900 | 2.670 |
High resolution limit [Å] | 2.600 | 2.600 |
Number of reflections | 13939 | 1029 |
<I/σ(I)> | 6.02 | 0.51 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.73 | 5.78 |
CC(1/2) | 0.995 | 0.381 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | ammonium dihydrogen phosphate, Tris-HCl, methylpentanediol, dithiothreitol |