7YW5
Crystal Structure of the ITS1 processing by human ribonuclease ISG20L2 with mutation D327A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.018, 59.017, 111.251 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.140 - 2.770 |
R-factor | 0.2616 |
Rwork | 0.259 |
R-free | 0.26870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wlj |
RMSD bond length | 0.007 |
RMSD bond angle | 0.876 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.140 | 52.140 | 2.850 |
High resolution limit [Å] | 2.770 | 12.410 | 2.770 |
Rmerge | 0.070 | 0.069 | 0.258 |
Rmeas | 0.089 | 0.085 | 0.326 |
Total number of observations | 40942 | ||
Number of reflections | 17433 | 194 | 1289 |
<I/σ(I)> | 9.81 | 14.44 | 3.35 |
Completeness [%] | 91.6 | 91.9 | 91.8 |
Redundancy | 2.349 | 2.397 | 2.306 |
CC(1/2) | 0.987 | 0.988 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 0.1 M BIS-TRIS propane pH9.0 30% PEG 6000 |