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7YT9

crystal structure of AGD1-4 of Arabidopsis AGDP3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9789
Spacegroup nameI 21 21 21
Unit cell lengths78.538, 129.205, 167.049
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.810 - 2.600
R-factor0.2461
Rwork0.245
R-free0.27220
Structure solution methodSAD
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.690
High resolution limit [Å]2.6005.6002.600
Rmerge0.0390.0240.705
Rmeas0.0450.0280.798
Rpim0.0210.0130.368
Total number of observations116578
Number of reflections2639027512611
<I/σ(I)>10.6
Completeness [%]99.298.199.7
Redundancy4.44.34.5
CC(1/2)0.9990.834
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52930.1 M lithium sulfate, 20% PEG1000 and 0.1M sodium citrate, pH 5.5

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