7YRK
Crystal structure of the hen egg lysozyme-2-oxidobenzylidene-threoninato-copper (II) complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-17A |
| Synchrotron site | Photon Factory |
| Beamline | BL-17A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-03-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.98 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 78.671, 78.671, 37.203 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.180 - 0.920 |
| R-factor | 0.1142 |
| Rwork | 0.113 |
| R-free | 0.12840 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5lyt |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.152 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | REFMAC |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.180 | 0.940 |
| High resolution limit [Å] | 0.920 | 0.920 |
| Rmerge | 0.084 | 0.568 |
| Number of reflections | 78748 | 2783 |
| <I/σ(I)> | 17 | |
| Completeness [%] | 98.2 | |
| Redundancy | 11.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1 M of acetic acid-sodium acetate buffer (pH 4.7) including 2-6 % (m/v) of NaCl |






