7YQ2
Crystal structure of photosystem II expressing psbA2 gene only
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 122.135, 228.172, 286.685 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.900 |
R-factor | 0.1528 |
Rwork | 0.151 |
R-free | 0.18440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wu2 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 5.000 | 2.010 |
High resolution limit [Å] | 1.900 | 4.000 | 1.900 |
Rmerge | 0.089 | 0.039 | 1.297 |
Rmeas | 0.100 | 0.044 | 1.453 |
Number of reflections | 621644 | 32749 | 95564 |
<I/σ(I)> | 11.03 | 32.61 | 1.35 |
Completeness [%] | 99.6 | 99.6 | 99.7 |
Redundancy | 4.9 | 4.685 | 4.807 |
CC(1/2) | 0.998 | 0.998 | 0.661 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 285 | 5% PEG 1450, 20mM NaCl, 10mM CaCl2, 40mM MgSO4, 20mM Mes BUFFER, pH 6.0, MICRO-BATCH METHOD UNDER OIL, TEMPARATURE 285K |