Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YKV

The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-16
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9791
Spacegroup nameP 21 21 2
Unit cell lengths83.481, 175.395, 66.265
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution75.490 - 2.040
R-factor0.17353
Rwork0.171
R-free0.22557
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle1.432
Data reduction softwareHKL-3000
Data scaling softwareAimless (0.5.29)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]175.4002.090
High resolution limit [Å]2.0402.040
Rmerge0.1471.105
Rmeas0.1581.189
Rpim0.0580.434
Total number of observations45661533745
Number of reflections628174576
<I/σ(I)>12.12.3
Completeness [%]100.0
Redundancy7.37.4
CC(1/2)0.9980.741
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29315% PEG 400, 50mM HEPES pH 7.6

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon