7YKV
The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 83.481, 175.395, 66.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 75.490 - 2.040 |
R-factor | 0.17353 |
Rwork | 0.171 |
R-free | 0.22557 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.432 |
Data reduction software | HKL-3000 |
Data scaling software | Aimless (0.5.29) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 175.400 | 2.090 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.147 | 1.105 |
Rmeas | 0.158 | 1.189 |
Rpim | 0.058 | 0.434 |
Total number of observations | 456615 | 33745 |
Number of reflections | 62817 | 4576 |
<I/σ(I)> | 12.1 | 2.3 |
Completeness [%] | 100.0 | |
Redundancy | 7.3 | 7.4 |
CC(1/2) | 0.998 | 0.741 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 15% PEG 400, 50mM HEPES pH 7.6 |