7YEK
TR-SFX MmCPDII-DNA complex: 500 ns time-point collected in SACLA. Includes 500 ns, dark, and extrapolated structure factors
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL2 |
Synchrotron site | SACLA |
Beamline | BL2 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2019-05-28 |
Detector | MPCCD |
Wavelength(s) | 1.0875 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.530, 115.710, 169.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.290 - 2.400 |
R-factor | 0.2201 |
Rwork | 0.220 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ydz |
RMSD bond length | 0.005 |
RMSD bond angle | 0.634 |
Data reduction software | CrystFEL |
Data scaling software | pointless |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.19_4092: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.290 | 2.260 |
High resolution limit [Å] | 2.240 | 2.240 |
Number of reflections | 69334 | 3429 |
<I/σ(I)> | 7.55 | 1.35 |
Completeness [%] | 100.0 | |
Redundancy | 460.26 | |
CC(1/2) | 0.991 | 0.514 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 4.6 | 296 | 100 mM Sodium Acetate pH 4.6 250 mM ammonium sulfate 4% PEG4000 (w/v) 50 mM DTT |