7Y9I
Complex structure of AtYchF1 with ppGpp
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17B1 |
Synchrotron site | SSRF |
Beamline | BL17B1 |
Temperature [K] | 113 |
Detector technology | PIXEL |
Collection date | 2019-03-24 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 72.460, 111.500, 52.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.005 - 2.070 |
Rwork | 0.206 |
R-free | 0.23550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ee0 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.425 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.010 | 2.120 |
High resolution limit [Å] | 2.070 | 2.070 |
Rmerge | 0.073 | |
Rpim | 0.028 | 0.392 |
Number of reflections | 26569 | 1922 |
<I/σ(I)> | 18.8 | |
Completeness [%] | 99.9 | |
Redundancy | 13 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 277 | PEG |