7Y5Y
X-ray Structure of Stay-Green (SGR) from Anaerolineae bacterium.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL44XU |
| Synchrotron site | SPring-8 |
| Beamline | BL44XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-07-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.90000 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 80.331, 80.331, 224.803 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 19.770 - 1.850 |
| R-factor | 0.2187 |
| Rwork | 0.218 |
| R-free | 0.23920 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | AlphaFold2 predicted structure of rice SGR (UniProt: Q652K1) |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.328 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER (1.18.2_3874) |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.740 | 1.840 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Rmerge | 0.061 | 1.158 |
| Number of reflections | 44094 | 6906 |
| <I/σ(I)> | 14.07 | |
| Completeness [%] | 99.4 | |
| Redundancy | 6.5 | |
| CC(1/2) | 0.999 | 0.829 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 100 mM Tris-HCl (pH 8.5), 200 mM Ammonium phosphate monobasic and 50% (v/v) 2-Methyl-2,4-pentanediol |






