Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7XVV

Structure of neuraminidase from influenza B-like viruses derived from spiny eel

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-07
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.97918
Spacegroup nameI 4
Unit cell lengths125.890, 125.890, 110.988
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.630 - 1.850
R-factor0.1568
Rwork0.155
R-free0.18670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7xvr
RMSD bond length0.007
RMSD bond angle0.918
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.950
High resolution limit [Å]1.8501.850
Rpim0.0470.403
Number of reflections61178
<I/σ(I)>12.72
Completeness [%]83.0
Redundancy8.8
CC(1/2)0.9980.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP92914.0 M Potassium formate, 0.1 M BIS-TRIS propane pH 9.0, 2% w/v Polyethylene glycol monomethyl ether 2,000. NA crystals were soaked in 10 mM zanamivir for 30 min

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon