7XSI
SdnG, a Diels Alderase catalyzed the formation of norbornene skeleton in Sordarin biosynthetic pathway
Replaces: 7XFKExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 1 |
Unit cell lengths | 55.870, 64.920, 83.990 |
Unit cell angles | 70.58, 72.43, 88.01 |
Refinement procedure
Resolution | 57.990 - 2.700 |
R-factor | 0.2317 |
Rwork | 0.228 |
R-free | 0.27790 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.477 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 57.990 | 57.990 | 2.830 |
High resolution limit [Å] | 2.700 | 8.950 | 2.700 |
Rmerge | 0.073 | 0.042 | 1.016 |
Rmeas | 0.087 | 0.048 | 1.200 |
Rpim | 0.046 | 0.024 | 0.632 |
Total number of observations | 97465 | 3030 | 13432 |
Number of reflections | 28569 | 793 | 3783 |
<I/σ(I)> | 10.1 | 30.2 | 1.4 |
Completeness [%] | 98.3 | 98.4 | 97.8 |
Redundancy | 3.4 | 3.8 | 3.6 |
CC(1/2) | 0.997 | 0.997 | 0.538 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.2 M Ammonium di-hydrogen phosphate, 0.1 M Tris pH 8.5 and 50 % v/v 2-Methyl-2,4-pentanediol |