7XRU
Drimenyl diphosphate synthase D303E from Streptomyces showdoensis in complex with 2-fluorofarnesyl diphosphate (2F-FPP) and Mg2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-15 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 51.350, 113.780, 179.810 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.510 - 2.500 |
R-factor | 0.1909 |
Rwork | 0.186 |
R-free | 0.23140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7xr7 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.240 | 54.240 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.090 | 0.044 | 0.291 |
Rmeas | 0.107 | 0.052 | 0.345 |
Rpim | 0.056 | 0.027 | 0.182 |
Total number of observations | 61183 | 1362 | 6671 |
Number of reflections | 18064 | 419 | 2056 |
<I/σ(I)> | 9.6 | 17.8 | 3.8 |
Completeness [%] | 97.1 | 93.8 | 98.7 |
Redundancy | 3.4 | 3.3 | 3.2 |
CC(1/2) | 0.984 | 0.996 | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289.15 | HEPES, NaCl |