7XQM
InDel-mutant short chain Dehydrogenase bound to SAH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 136.380, 82.760, 92.660 |
Unit cell angles | 90.00, 112.00, 90.00 |
Refinement procedure
Resolution | 44.010 - 2.710 |
R-factor | 0.1811 |
Rwork | 0.181 |
R-free | 0.18150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2d1y |
RMSD bond length | 0.014 |
RMSD bond angle | 1.551 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.010 | 8.130 |
High resolution limit [Å] | 2.700 | 2.710 |
Number of reflections | 25837 | 25801 |
<I/σ(I)> | 24.05 | |
Completeness [%] | 98.6 | |
Redundancy | 2.8 | |
CC(1/2) | 0.997 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 6% v/v 2-propanol, 0.1 M sodium acetate trihydrate pH 4.5 and 26% v/v polyethylene glycol |