7XPQ
Crystal Structure of UDP-Glc/GlcNAc 4-Epimerase with NAD/UDP-GlcNAc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.873, 84.945, 73.436 |
Unit cell angles | 90.00, 110.69, 90.00 |
Refinement procedure
Resolution | 20.077 - 2.150 |
R-factor | 0.1998 |
Rwork | 0.197 |
R-free | 0.25020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7xpo |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.077 | 2.227 |
High resolution limit [Å] | 2.150 | 2.150 |
Number of reflections | 40224 | 3959 |
<I/σ(I)> | 6.42 | |
Completeness [%] | 96.7 | |
Redundancy | 7 | |
CC(1/2) | 0.991 | 0.197 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 300 | 0.1M Sodium malonate pH 5.0, 12% w/V PEG 3350 |