7XP9
Phytophthora infesfans RxLR effector AVRvnt1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 54.004, 54.004, 116.547 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.470 - 1.930 |
R-factor | 0.2263 |
Rwork | 0.222 |
R-free | 0.26290 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.960 |
High resolution limit [Å] | 1.930 | 5.240 | 1.930 |
Rmerge | 0.058 | 0.050 | 0.165 |
Rmeas | 0.059 | 0.051 | 0.167 |
Rpim | 0.010 | 0.009 | 0.026 |
Number of reflections | 14032 | 466 | 364 |
<I/σ(I)> | 23.6 | ||
Completeness [%] | 96.9 | 92.6 | 95.8 |
Redundancy | 40.2 | 31.3 | 41.4 |
CC(1/2) | 0.999 | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 277.15 | 25% w/v Polyethylene glycol 3,350, 0.1 M Bis-Tris pH 5.5 and 0.2 M Li2SO4 |