7XNM
Structure of porcine dipeptidyl peptidase 4 inhibitory peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 190 |
Detector technology | PIXEL |
Collection date | 2021-02-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97894 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 257.340, 75.617, 121.679 |
Unit cell angles | 90.00, 110.20, 90.00 |
Refinement procedure
Resolution | 29.480 - 3.580 |
R-factor | 0.2289 |
Rwork | 0.223 |
R-free | 0.29890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wcy |
RMSD bond length | 0.004 |
RMSD bond angle | 0.676 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.480 | 3.600 |
High resolution limit [Å] | 3.575 | 3.575 |
Number of reflections | 26023 | 168262 |
<I/σ(I)> | 2 | |
Completeness [%] | 99.0 | |
Redundancy | 6.5 | |
CC(1/2) | 0.999 | 0.717 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298.15 | 20% PEG 3350, 0.2 M ammonium chloride |