7XHJ
Crystal structure of RuvC from Deinococcus radiodurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2017-01-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.020, 72.600, 113.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.540 - 1.600 |
R-factor | 0.2054 |
Rwork | 0.204 |
R-free | 0.22290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hjr |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.540 | 27.540 | 1.640 |
High resolution limit [Å] | 1.600 | 7.150 | 1.600 |
Rmerge | 0.050 | 0.027 | 0.355 |
Rmeas | 0.057 | 0.033 | 0.411 |
Total number of observations | 160024 | ||
Number of reflections | 42426 | 148 | 3122 |
<I/σ(I)> | 16.52 | 25.2 | 4.35 |
Completeness [%] | 94.7 | 24.7 | 96.8 |
Redundancy | 3.772 | 2.635 | 3.869 |
CC(1/2) | 0.998 | 0.998 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 298 | ammonium sulfate, BIS-TRIS, Polyethylene glycol 3350 |