7XEY
EDS1-PAD4 complexed with pRib-ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL19U1 |
Synchrotron site | NFPSS |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 82.357, 91.863, 94.271 |
Unit cell angles | 90.00, 111.79, 90.00 |
Refinement procedure
Resolution | 46.070 - 2.290 |
R-factor | 0.186 |
Rwork | 0.184 |
R-free | 0.23250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nfu |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.330 |
High resolution limit [Å] | 2.290 | 6.210 | 2.290 |
Rmerge | 0.137 | 0.044 | 0.694 |
Rmeas | 0.149 | 0.048 | 0.783 |
Rpim | 0.058 | 0.019 | 0.353 |
Total number of observations | 368298 | ||
Number of reflections | 57868 | 2981 | 2850 |
<I/σ(I)> | 5.2 | ||
Completeness [%] | 98.4 | 98.3 | 98 |
Redundancy | 6.4 | 6.6 | 4.5 |
CC(1/2) | 0.999 | 0.766 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 293 | 0.04 M citric acid, 0.06 M Bis-Tris propane pH 6.4, 20% w/v polyethylene glycol 3350 |